Aron

On Fri, Aug 16, 2013 at 12:49 PM, Al Bersch abersch@museumca.org wrote:

The key is likely this snippet, from near the beginning of that long and
singularly unhelpful chain of messages:
"org.collectionspace.chain.csp.config.ConfigException: Error loading
config"

There may have been an error made in whatever configuration file, or
files, were modified.  After they were deployed (copied) to the server,
when the Application layer read them, it got confused and barfed out this
long stack trace.

Typically, this means the file(s), after being modified, weren't
well-formed XML - perhaps an ending tag was left out somewhere? - or they
didn't conform to the Application layer's expectation of what 'tags' (XML
elements) are expected, in which hierarchical locations within the file.

Yes, reverting to a snapshot and re-deploying (via 'mvn clean install
-DskipTests') and restarting Tomcat, should resolve the issue.  You might
also try, however, using a utility app that can show you differences
between two files - your current version and your snapshot - and see if the
error is readily made apparent by looking at those changes in that 'diff'
view.  (If you're using Mac OS X, there's a list of such apps at
http://apple.stackexchange.com/a/87188)

It's also worth checking the current cspace-app.log and catalina.{today's
date}.log to see if there may be any log message specifically pinpointing
the configuration error.

Aron

On Fri, Aug 16, 2013 at 1:16 PM, Al Bersch abersch@museumca.org wrote:

the application layer. When I navigated to our tenant, the login screen is
blank except for a place to put a user name and password. when I submit my
password, I get this message:  Any idea what I did wrong? Thanks!

can always go back in time and try again.

org.collectionspace.chain.controller.BadRequestException: Cannot initialise
CSPs org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:185)
at
org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant(TenantUIServlet.java:117)
at
org.collectionspace.chain.controller.TenantUIServlet.service(TenantUIServlet.java:568)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.PerflogFilter.doFilter(PerflogFilter.java:33)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.CharSetFilter.doFilter(CharSetFilter.java:99)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
at
org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:589)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:291)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859)
at
org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:602)
at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
at java.lang.Thread.run(Thread.java:724) Caused by:
org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:64)
at
org.collectionspace.chain.controller.TenantServlet.load_config(TenantServlet.java:156)
at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:179)
... 22 more Caused by:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.csp.config.impl.parser.ConfigErrorHandler.fail_if_necessary(ConfigErrorHandler.java:78)
at
org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse(ConfigParser.java:74)
at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:54)
... 24 more

initialise CSPs org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:185)
at
org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant(TenantUIServlet.java:117)
at
org.collectionspace.chain.controller.TenantUIServlet.service(TenantUIServlet.java:568)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.PerflogFilter.doFilter(PerflogFilter.java:33)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.CharSetFilter.doFilter(CharSetFilter.java:99)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
at
org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:589)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:291)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859)
at
org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:602)
at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
at java.lang.Thread.run(Thread.java:724) Caused by:
org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:64)
at
org.collectionspace.chain.controller.TenantServlet.load_config(TenantServlet.java:156)
at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:179)
... 22 more Caused by:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.csp.config.impl.parser.ConfigErrorHandler.fail_if_necessary(ConfigErrorHandler.java:78)
at
org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse(ConfigParser.java:74)
at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:54)
... 24 more

(org.collectionspace.chain.controller.BadRequestException: Cannot
initialise CSPs org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:185)
at
org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant(TenantUIServlet.java:117)
at
org.collectionspace.chain.controller.TenantUIServlet.service(TenantUIServlet.java:568)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.PerflogFilter.doFilter(PerflogFilter.java:33)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.CharSetFilter.doFilter(CharSetFilter.java:99)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
at
org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:589)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:291)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859)
at
org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:602)
at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
at java.lang.Thread.run(Thread.java:724) Caused by:
org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:64)
at
org.collectionspace.chain.controller.TenantServlet.load_config(TenantServlet.java:156)
at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:179)
... 22 more Caused by:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.csp.config.impl.parser.ConfigErrorHandler.fail_if_necessary(ConfigErrorHandler.java:78)
at
org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse(ConfigParser.java:74)
at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:54)
... 24 more ).

building and deploying the App layer with your dropdown list changes,
rather than 'mvn deploy -DskipTests'.

:-), but CollectionSpace Services layer uses Maven to build artifacts and
Ant buildfiles to deploy (copy) them to the server (hence 'mvn clean
install' followed by 'ant deploy'), while the Application and UI layers use
Maven ('mvn install') for both tasks.  There are some historical and
technical reasons for this difference, not worth going into ...

wrote:

application layer source code, and when I ran mvn deploy -DskipTests I get
this error:

org.apache.maven.plugins:maven-deploy-plugin:2.4

cannot be instantiated

artifacts -->

http://nightly.collectionspace.org:8081/artifactory/libs-snapshot-local
</url>

snapshot)? Our installation is on a virtual server in linode.

I'm guessing that the error is party due to the url being mapped to
nightly.collectionspace.org.

http://lists.collectionspace.org/mailman/listinfo/talk_lists.collectionspace.org

Hi again,

Ok, I think I must have messed up somewhere when changing the files in the application layer. When I navigated to our tenant, the login screen is blank except for a place to put a user name and password. when I submit my password, I get this message: Any idea what I did wrong? Thanks!

I have a snapshot prior to the changes in the application layer, so I can always go back in time and try again.

Al

HTTP Status 400 - org.collectionspace.chain.controller.BadRequestException: Cannot initialise CSPs org.collectionspace.csp.api.core.CSPDependencyException: org.collectionspace.chain.csp.config.ConfigException: Error loading config. See messages for details: summary Exception raised during parsing at org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:185) at org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant(TenantUIServlet.java:117) at org.collectionspace.chain.controller.TenantUIServlet.service(TenantUIServlet.java:568) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.collectionspace.chain.controller.filters.PerflogFilter.doFilter(PerflogFilter.java:33) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.collectionspace.chain.controller.filters.CharSetFilter.doFilter(CharSetFilter.java:99) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:589) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:291) at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859) at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:602) at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489) at java.lang.Thread.run(Thread.java:724) Caused by: org.collectionspace.csp.api.core.CSPDependencyException: org.collectionspace.chain.csp.config.ConfigException: Error loading config. See messages for details: summary Exception raised during parsing at org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:64) at org.collectionspace.chain.controller.TenantServlet.load_config(TenantServlet.java:156) at org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:179) ... 22 more Caused by: org.collectionspace.chain.csp.config.ConfigException: Error loading config. See messages for details: summary Exception raised during parsing at org.collectionspace.chain.csp.config.impl.parser.ConfigErrorHandler.fail_if_necessary(ConfigErrorHandler.java:78) at org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse(ConfigParser.java:74) at org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:54) ... 24 more

type Status report

message org.collectionspace.chain.controller.BadRequestException: Cannot initialise CSPs org.collectionspace.csp.api.core.CSPDependencyException: org.collectionspace.chain.csp.config.ConfigException: Error loading config. See messages for details: summary Exception raised during parsing at org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:185) at org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant(TenantUIServlet.java:117) at org.collectionspace.chain.controller.TenantUIServlet.service(TenantUIServlet.java:568) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.collectionspace.chain.controller.filters.PerflogFilter.doFilter(PerflogFilter.java:33) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.collectionspace.chain.controller.filters.CharSetFilter.doFilter(CharSetFilter.java:99) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:589) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:291) at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859) at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:602) at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489) at java.lang.Thread.run(Thread.java:724) Caused by: org.collectionspace.csp.api.core.CSPDependencyException: org.collectionspace.chain.csp.config.ConfigException: Error loading config. See messages for details: summary Exception raised during parsing at org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:64) at org.collectionspace.chain.controller.TenantServlet.load_config(TenantServlet.java:156) at org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:179) ... 22 more Caused by: org.collectionspace.chain.csp.config.ConfigException: Error loading config. See messages for details: summary Exception raised during parsing at org.collectionspace.chain.csp.config.impl.parser.ConfigErrorHandler.fail_if_necessary(ConfigErrorHandler.java:78) at org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse(ConfigParser.java:74) at org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:54) ... 24 more

description The request sent by the client was syntactically incorrect (org.collectionspace.chain.controller.BadRequestException: Cannot initialise CSPs org.collectionspace.csp.api.core.CSPDependencyException: org.collectionspace.chain.csp.config.ConfigException: Error loading config. See messages for details: summary Exception raised during parsing at org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:185) at org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant(TenantUIServlet.java:117) at org.collectionspace.chain.controller.TenantUIServlet.service(TenantUIServlet.java:568) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.collectionspace.chain.controller.filters.PerflogFilter.doFilter(PerflogFilter.java:33) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.collectionspace.chain.controller.filters.CharSetFilter.doFilter(CharSetFilter.java:99) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:589) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:291) at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859) at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:602) at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489) at java.lang.Thread.run(Thread.java:724) Caused by: org.collectionspace.csp.api.core.CSPDependencyException: org.collectionspace.chain.csp.config.ConfigException: Error loading config. See messages for details: summary Exception raised during parsing at org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:64) at org.collectionspace.chain.controller.TenantServlet.load_config(TenantServlet.java:156) at org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:179) ... 22 more Caused by: org.collectionspace.chain.csp.config.ConfigException: Error loading config. See messages for details: summary Exception raised during parsing at org.collectionspace.chain.csp.config.impl.parser.ConfigErrorHandler.fail_if_necessary(ConfigErrorHandler.java:78) at org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse(ConfigParser.java:74) at org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:54) ... 24 more ).

Al Bersch
Digital Project Coordinator
Oakland Museum of California
1000 Oak Street, Oakland, CA 94607
abersch@museumca.org
510-318-8468

From: "Aron Roberts" < aronroberts@gmail.com >
To: "Al Bersch" < abersch@museumca.org >
Cc: "talk" < talk@lists.collectionspace.org >
Sent: Friday, August 16, 2013 12:58:56 PM
Subject: Re: [Talk] deploy mvn error

Hi Al,

You likely will have success with 'mvn clean install -DskipTests' when building and deploying the App layer with your dropdown list changes, rather than 'mvn deploy -DskipTests'.

It's a bit confusing (and I hope I don't need to keep repeating this :-), but CollectionSpace Services layer uses Maven to build artifacts and Ant buildfiles to deploy (copy) them to the server (hence 'mvn clean install' followed by 'ant deploy'), while the Application and UI layers use Maven ('mvn install') for both tasks. There are some historical and technical reasons for this difference, not worth going into ...

Aron

On Fri, Aug 16, 2013 at 12:49 PM, Al Bersch < abersch@museumca.org > wrote:

Aron

On Fri, Aug 16, 2013 at 1:16 PM, Al Bersch abersch@museumca.org wrote:

Hi Aron,

Thanks so much again for your continued assistance. And for the plug for
using github as a backup resource - I'll do that, and also apologize in
advance for the cut-and-paste text below.

I installed DiffMerge, but I'm not sure what to compare, since the file I
added to the omca tenant (omca-collectionobject.xml), wasn't there in the
previous snapshot. I think I'm a little confused.

I looked in the cspace-app.log and catalina.out (can you tell me where I
might find catalina.(today'sdate).log?) and here are some snippets, first
from cspace-app.log:

2013-08-19 21:46:13,363 WARN  [http-8180-3]
[org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler:218]
Could not merge the include files: settings.xml,local-omca-settings.xml
2013-08-19 21:46:13,364 ERROR [http-8180-3]
[org.collectionspace.chain.csp.config.impl.parser.ConfigLoadingMessagesImpl:16]
Message: Exception raised during parsing

Stack :
org.collectionspace.chain.csp.config.impl.parser.AssemblingParser.parse (61)
org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse (62)
org.collectionspace.csp.container.impl.CSPManagerImpl.configure (54)
org.collectionspace.chain.controller.TenantServlet.load_config (156)
org.collectionspace.chain.controller.TenantServlet.setup (179)
org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant (117)
org.collectionspace.chain.controller.TenantUIServlet.service (568)
javax.servlet.http.HttpServlet.service (717)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter (290)
org.apache.catalina.core.ApplicationFilterChain.doFilter (206)
org.collectionspace.chain.controller.filters.PerflogFilter.doFilter (33)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter (235)
org.apache.catalina.core.ApplicationFilterChain.doFilter (206)
org.collectionspace.chain.controller.filters.CharSetFilter.doFilter (99)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter (235)
org.apache.catalina.core.ApplicationFilterChain.doFilter (206)
org.apache.catalina.core.StandardWrapperValve.invoke (233)
org.apache.catalina.core.StandardContextValve.invoke (191)
org.apache.catalina.core.StandardHostValve.invoke (127)
org.apache.catalina.valves.ErrorReportValve.invoke (102)
org.apache.catalina.valves.AccessLogValve.invoke (589)
org.apache.catalina.core.StandardEngineValve.invoke (109)
org.apache.catalina.connector.CoyoteAdapter.service (291)
org.apache.coyote.http11.Http11Processor.process (859)
org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process
(602)
org.apache.tomcat.util.net.JIoEndpoint$Worker.run (489)
java.lang.Thread.run (724)

CAUSED BY
Message: Could not load source

then from catalina.out:

2013-08-19 17:49:25,334 ERROR [main]
[org.collectionspace.services.common.config.ConfigUtils:51] No domain name
was specified on call to getRepositoryName() method.2013-08-19
17:49:25,334 ERROR [main]
[org.collectionspace.services.common.config.ConfigUtils:51] No domain name
was specified on call to getRepositoryName() method.2013-08-19
17:49:25,334 ERROR [main]
[org.collectionspace.services.common.config.ConfigUtils:51] No domain name
was specified on call to getRepositoryName() method.[INFO] Starting up
the CollectionSpace Services' JAX-RS application.Static initializtion of:
org.collectionspace.services.common.security.SecurityInterceptor[INFO]
CollectionSpace Services' JAX-RS application started.2013-08-19
17:49:27,339 (0) [http-8180-4] INFO
org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler:
XMLMerge result output to:
/usr/local/share/apache-tomcat-6.0.33/temp/merged-settings.xml_local-omca-settings.xml-.xml2013-08-19
17:49:29,695 (2356) [http-8180-2] INFO
org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler:
XMLMerge result output to:
/usr/local/share/apache-tomcat-6.0.33/temp/merged-settings.xml_local-omca-settings.xml-.xml2013-08-19
17:49:29,732 (2393) [net.sf.ehcache.CacheManager@23aeae74] INFO
net.sf.ehcache.util.UpdateChecker: New update(s) found: 2.6.5 [
http://www.terracotta.org/confluence/display/release/Release+Notes+Ehcache+Core+2.6].
Please check http://ehcache.org for the latest version.Could not get
session from CSPACESESSID cookie with value:
31b6c5daf4d4180636604cb25ac9f75f2013-08-19 17:49:47,810 WARN
[http-8180-7]
[org.collectionspace.services.common.security.SecurityInterceptor:358]
Attempt to logout when Nuxeo login context was null2013-08-19
17:49:47,953 WARN  [http-8180-7]
[org.springframework.security.web.context.HttpSessionSecurityContextRepository:396]
Failed to create a session, as response has been committed. Unable to store
SecurityContext.2013-08-19 17:49:48,765 WARN  [http-8180-7]
[org.collectionspace.services.common.security.SecurityInterceptor:358]
Attempt to logout when Nuxeo login context was null2013-08-19
17:49:48,773 WARN  [http-8180-7]
[org.springframework.security.web.context.HttpSessionSecurityContextRepository:396]
Failed to create a session, as response has been committed. Unable to store
SecurityContext.2013-08-19 21:07:17,771 ERROR
[ContainerBackgroundProcessor[StandardEngine[Catalina]]]
[org.apache.catalina.loader.WebappClassLoader:2191] The web application
[/collectionspace] appears to have started a thread named
[net.sf.ehcache.CacheManager@23aeae74] but has failed to stop it. This is
very likely to create a memory leak.2013-08-19 21:07:17,772 ERROR
[ContainerBackgroundProcessor[StandardEngine[Catalina]]]
[org.apache.catalina.loader.WebappClassLoader:2191] The web application
[/collectionspace] appears to have started a thread named
[MultiThreadedHttpConnectionManager cleanup] but has failed to stop it.
This is very likely to create a memory leak.2013-08-19 21:07:17,780 ERROR
[ContainerBackgroundProcessor[StandardEngine[Catalina]]]
[org.apache.catalina.loader.WebappClassLoader:2453] The web application
[/collectionspace] created a ThreadLocal with key of type
[ch.elca.el4j.services.xmlmerge.XmlMergeContext$1] (value
[ch.elca.el4j.services.xmlmerge.XmlMergeContext$1@7e421b4f]) and a value
of type [java.util.HashMap] (value [{}]) but failed to remove it when the
web application was stopped. This is very likely to create a memory leak.2013-08-19
21:07:17,781 ERROR [ContainerBackgroundProcessor[StandardEngine[Catalina]]]
[org.apache.catalina.loader.WebappClassLoader:2453] The web application
[/collectionspace] created a ThreadLocal with key of type
[ch.elca.el4j.services.xmlmerge.XmlMergeContext$1] (value
[ch.elca.el4j.services.xmlmerge.XmlMergeContext$1@7e421b4f]) and a value
of type [java.util.HashMap] (value [{}]) but failed to remove it when the
web application was stopped. This is very likely to create a memory leak.2013-08-19
21:09:34,685 (0) [http-8180-4] WARN
org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler:
Could not merge the include files: settings.xml,local-omca-settings.xml

It looks like the problem is with merging settings.xml and
local-omca-settings.xml?

I've tried a second time to create the configuration change in
omca-collectionobject.xml (a newly created xml file with only this snippet
in it:

+<record id="collection-object">
+

• <section id="identificationInformation">

•    <repeat id="responsibleDepartments" has-primary="yes">
  

<selector>object-identification-responsible-department</selector>

•        <field id="responsibleDepartment" ui-search="repeatable"
  

mini="search"

•         seperate_ui_container="true">
  

<selector>object-identification-responsible-department</selector>

•            <options>
  

•                <option id="">Please select a value</option>
  

•                <option id="art">Art</option>
  

•                <option id="history">History</option>
  

•                <option id="science">Science</option>
  

•                <option id="collections">Collections</option>
  

•                <option id="education">Education</option>
  

•                <option id="professionalservices">Professional
  

Services</option>

•                <option id="multi">Multi</option>
  

•            </options>
  

•        </field>
  

•    </repeat>
  

•    <field id="collection" ui-search="repeatable"
  

seperate_ui_container="true">

•        <selector>object-identification-collection</selector>
  

•        <options>
  

•           <option id="">Please select a value</option>
  

•           <option id="art">Art</option>
  

•           <option id="artandartifact">Art and Artifact</option>
  

•           <option id="exhibit">Exhibit</option>
  

•           <option id="history">History</option>
  

•           <option id="scientomology">SCI-Entomology</option>
  

•           <option id="scifineart">SCI-Fine Art</option>
  

•           <option id="scigalleryspecimens">SCI-Gallery
  

Specimens</option>

•           <option id="scigeology">SCI-Geology</option>
  

•           <option id="sciherbarium">SCI-Herbarium</option>
  

•           <option id="sciherpetology">SCI-Herpetology</option>
  

•           <option id="sciicthyology">SCI-Icthyology</option>
  

•           <option id="sciinvertebrates">SCI-Invertebrates</option>
  

•           <option id="scilapidary">SCI-Lapidary</option>
  

•           <option id="scimalacology">SCI-Malacology</option>
  

•           <option id="scimammalogy">SCI-Mammalogy</option>
  

•           <option id="scimiscellaneous">SCI-Miscellaneous</option>
  

•           <option id="sciornithology">SCI-Ornithology</option>
  

•           <option id="scipaleontology">SCI-Paleontology</option>
  

•           <option id="sciphoto">SCI-Photo</option>
  

•           <option id="scisnuffbottles">SCI-Snuff Bottles</option>
  

•           <option id="specimen">Specimen</option>
  

•        </options>
  

•    </field>
  

• </section>

+</record>

then according to your last email, I ran "mvn clean install -DskipTest"
rather than "mvn deploy -DskipTests". I ran this in the application layer
folder called "application" that contains the pom.xml file. In my path it
looks like /home/root/application-source/application/. Then, do I
understand I also need to run "ant deploy"? I wasn't able to run this in
the same folder - I got an error saying this is no build file.

I'm going off your previous instructions, as well as the documentation on
the wiki for customizing the application layer:

Hi Becky and Al,
One more set of notes on making 'starting out' customizations,
below: this one a customization of options in dropdown menus.
Aron
(Recommendation: start the CollectionSpace server before making the
following changes.  This will help ensure those changes are made
'live.')

• An example of how to replace the default sets of options in the
  dropdown menus for the Responsible Department and OMCA Collection
  fields.
  The existing documentation on updating these option lists is
  confusing, and wildly out of date; we expect to be updating it in the
  near future.  The customization method shown here as an example
  reflects recently-added 'merge' capabilities that allow you to simply
  replicate the block of configuration you want to customize, within a
  separate file for your own museum; it will override the corresponding
  configuration block in the default settings:
  Actual change(s) made, within the source code tree for
  CollectionSpace's Application layer:

https://github.com/aronr/application/commit/b7a47d94fc6d44d0cad74f6444710a35373291c7
You can compare this to the default configuration file for the
Cataloging record, in which the default options for those two dropdown
menus appear:

https://github.com/aronr/application/blob/b7a47d94fc6d44d0cad74f6444710a35373291c7/tomcat-main/src/main/resources/defaults/base-collectionobject.xml#L112
To copy (deploy) these changes to the server folder, enter the
following at a command prompt, from within the top-level folder of the
Application source code tree:
mvn deploy -DskipTests

Sorry I'm not getting this! Do you have any ideas?

Thanks again,

Al

Al Bersch
Digital Project Coordinator
Oakland Museum of California
1000 Oak Street, Oakland, CA 94607
abersch@museumca.org
510-318-8468

*From: *"Aron Roberts" aronroberts@gmail.com
*To: *"Al Bersch" abersch@museumca.org
*Cc: *"talk" talk@lists.collectionspace.org
*Sent: *Friday, August 16, 2013 1:28:48 PM

*Subject: *Re: [Talk] deploy mvn error

The key is likely this snippet, from near the beginning of that long and
singularly unhelpful chain of messages:
"org.collectionspace.chain.csp.config.ConfigException: Error loading
config"

There may have been an error made in whatever configuration file, or
files, were modified.  After they were deployed (copied) to the server,
when the Application layer read them, it got confused and barfed out this
long stack trace.

Typically, this means the file(s), after being modified, weren't
well-formed XML - perhaps an ending tag was left out somewhere? - or they
didn't conform to the Application layer's expectation of what 'tags' (XML
elements) are expected, in which hierarchical locations within the file.

Yes, reverting to a snapshot and re-deploying (via 'mvn clean install
-DskipTests') and restarting Tomcat, should resolve the issue.  You might
also try, however, using a utility app that can show you differences
between two files - your current version and your snapshot - and see if the
error is readily made apparent by looking at those changes in that 'diff'
view.  (If you're using Mac OS X, there's a list of such apps at
http://apple.stackexchange.com/a/87188)

It's also worth checking the current cspace-app.log and catalina.{today's
date}.log to see if there may be any log message specifically pinpointing
the configuration error.

Aron

On Fri, Aug 16, 2013 at 1:16 PM, Al Bersch abersch@museumca.org wrote:

the application layer. When I navigated to our tenant, the login screen is
blank except for a place to put a user name and password. when I submit my
password, I get this message:  Any idea what I did wrong? Thanks!

can always go back in time and try again.

org.collectionspace.chain.controller.BadRequestException: Cannot initialise
CSPs org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:185)
at
org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant(TenantUIServlet.java:117)
at
org.collectionspace.chain.controller.TenantUIServlet.service(TenantUIServlet.java:568)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.PerflogFilter.doFilter(PerflogFilter.java:33)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.CharSetFilter.doFilter(CharSetFilter.java:99)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
at
org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:589)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:291)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859)
at
org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:602)
at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
at java.lang.Thread.run(Thread.java:724) Caused by:
org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:64)
at
org.collectionspace.chain.controller.TenantServlet.load_config(TenantServlet.java:156)
at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:179)
... 22 more Caused by:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.csp.config.impl.parser.ConfigErrorHandler.fail_if_necessary(ConfigErrorHandler.java:78)
at
org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse(ConfigParser.java:74)
at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:54)
... 24 more

initialise CSPs org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:185)
at
org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant(TenantUIServlet.java:117)
at
org.collectionspace.chain.controller.TenantUIServlet.service(TenantUIServlet.java:568)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.PerflogFilter.doFilter(PerflogFilter.java:33)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.CharSetFilter.doFilter(CharSetFilter.java:99)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
at
org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:589)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:291)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859)
at
org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:602)
at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
at java.lang.Thread.run(Thread.java:724) Caused by:
org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:64)
at
org.collectionspace.chain.controller.TenantServlet.load_config(TenantServlet.java:156)
at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:179)
... 22 more Caused by:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.csp.config.impl.parser.ConfigErrorHandler.fail_if_necessary(ConfigErrorHandler.java:78)
at
org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse(ConfigParser.java:74)
at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:54)
... 24 more

(org.collectionspace.chain.controller.BadRequestException: Cannot
initialise CSPs org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:185)
at
org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant(TenantUIServlet.java:117)
at
org.collectionspace.chain.controller.TenantUIServlet.service(TenantUIServlet.java:568)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.PerflogFilter.doFilter(PerflogFilter.java:33)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.collectionspace.chain.controller.filters.CharSetFilter.doFilter(CharSetFilter.java:99)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
at
org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:589)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:291)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859)
at
org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:602)
at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
at java.lang.Thread.run(Thread.java:724) Caused by:
org.collectionspace.csp.api.core.CSPDependencyException:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:64)
at
org.collectionspace.chain.controller.TenantServlet.load_config(TenantServlet.java:156)
at
org.collectionspace.chain.controller.TenantServlet.setup(TenantServlet.java:179)
... 22 more Caused by:
org.collectionspace.chain.csp.config.ConfigException: Error loading config.
See messages for details: summary Exception raised during parsing at
org.collectionspace.chain.csp.config.impl.parser.ConfigErrorHandler.fail_if_necessary(ConfigErrorHandler.java:78)
at
org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse(ConfigParser.java:74)
at
org.collectionspace.csp.container.impl.CSPManagerImpl.configure(CSPManagerImpl.java:54)
... 24 more ).

building and deploying the App layer with your dropdown list changes,
rather than 'mvn deploy -DskipTests'.

:-), but CollectionSpace Services layer uses Maven to build artifacts and
Ant buildfiles to deploy (copy) them to the server (hence 'mvn clean
install' followed by 'ant deploy'), while the Application and UI layers use
Maven ('mvn install') for both tasks.  There are some historical and
technical reasons for this difference, not worth going into ...

wrote:

application layer source code, and when I ran mvn deploy -DskipTests I get
this error:

org.apache.maven.plugins:maven-deploy-plugin:2.4

cannot be instantiated

artifacts -->

http://nightly.collectionspace.org:8081/artifactory/libs-snapshot-local
</url>

snapshot)? Our installation is on a virtual server in linode.

I'm guessing that the error is party due to the url being mapped to
nightly.collectionspace.org.

http://lists.collectionspace.org/mailman/listinfo/talk_lists.collectionspace.org

Hi Aron,

Thanks so much again for your continued assistance. And for the plug for using github as a backup resource - I'll do that, and also apologize in advance for the cut-and-paste text below.

I installed DiffMerge, but I'm not sure what to compare, since the file I added to the omca tenant (omca-collectionobject.xml), wasn't there in the previous snapshot. I think I'm a little confused.

I looked in the cspace-app.log and catalina.out (can you tell me where I might find catalina.(today'sdate).log?) and here are some snippets, first from cspace-app.log:

2013-08-19 21:46:13,363 WARN [http-8180-3] [org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler:218] Could not merge the include files: settings.xml,local-omca-settings.xml
2013-08-19 21:46:13,364 ERROR [http-8180-3] [org.collectionspace.chain.csp.config.impl.parser.ConfigLoadingMessagesImpl:16] Message: Exception raised during parsing

Stack : org.collectionspace.chain.csp.config.impl.parser.AssemblingParser.parse (61)
org.collectionspace.chain.csp.config.impl.parser.ConfigParser.parse (62)
org.collectionspace.csp.container.impl.CSPManagerImpl.configure (54)
org.collectionspace.chain.controller.TenantServlet.load_config (156)
org.collectionspace.chain.controller.TenantServlet.setup (179)
org.collectionspace.chain.controller.TenantUIServlet.serviceUIWTenant (117)
org.collectionspace.chain.controller.TenantUIServlet.service (568)
javax.servlet.http.HttpServlet.service (717)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter (290)
org.apache.catalina.core.ApplicationFilterChain.doFilter (206)
org.collectionspace.chain.controller.filters.PerflogFilter.doFilter (33)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter (235)
org.apache.catalina.core.ApplicationFilterChain.doFilter (206)
org.collectionspace.chain.controller.filters.CharSetFilter.doFilter (99)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter (235)
org.apache.catalina.core.ApplicationFilterChain.doFilter (206)
org.apache.catalina.core.StandardWrapperValve.invoke (233)
org.apache.catalina.core.StandardContextValve.invoke (191)
org.apache.catalina.core.StandardHostValve.invoke (127)
org.apache.catalina.valves.ErrorReportValve.invoke (102)
org.apache.catalina.valves.AccessLogValve.invoke (589)
org.apache.catalina.core.StandardEngineValve.invoke (109)
org.apache.catalina.connector.CoyoteAdapter.service (291)
org.apache.coyote.http11.Http11Processor.process (859)
org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process (602)
org.apache.tomcat.util.net.JIoEndpoint$Worker.run (489)
java.lang.Thread.run (724)

CAUSED BY
Message: Could not load source

then from catalina.out:

2013-08-19 17:49:25,334 ERROR [main] [org.collectionspace.services.common.config.ConfigUtils:51] No domain name was specified on call to getRepositoryName() method.2013-08-19 17:49:25,334 ERROR [main] [org.collectionspace.services.common.config.ConfigUtils:51] No domain name was specified on call to getRepositoryName() method.2013-08-19 17:49:25,334 ERROR [main] [org.collectionspace.services.common.config.ConfigUtils:51] No domain name was specified on call to getRepositoryName() method.[INFO] Starting up the CollectionSpace Services' JAX-RS application.Static initializtion of: org.collectionspace.services.common.security.SecurityInterceptor[INFO] CollectionSpace Services' JAX-RS application started.2013-08-19 17:49:27,339 (0) [http-8180-4] INFO org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler: XMLMerge result output to: /usr/local/share/apache-tomcat-6.0.33/temp/merged-settings.xml_local-omca-settings.xml-.xml2013-08-19 17:49:29,695 (2356) [http-8180-2] INFO org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler: XMLMerge result output to: /usr/local/share/apache-tomcat-6.0.33/temp/merged-settings.xml_local-omca-settings.xml-.xml2013-08-19 17:49:29,732 (2393) [net.sf.ehcache.CacheManager@23aeae74] INFO net.sf.ehcache.util.UpdateChecker: New update(s) found: 2.6.5 [ http://www.terracotta.org/confluence/display/release/Release+Notes+Ehcache+Core+2.6 ]. Please check http://ehcache.org for the latest version.Could not get session from CSPACESESSID cookie with value: 31b6c5daf4d4180636604cb25ac9f75f2013-08-19 17:49:47,810 WARN [http-8180-7] [org.collectionspace.services.common.security.SecurityInterceptor:358] Attempt to logout when Nuxeo login context was null2013-08-19 17:49:47,953 WARN [http-8180-7] [org.springframework.security.web.context.HttpSessionSecurityContextRepository:396] Failed to create a session, as response has been committed. Unable to store SecurityContext.2013-08-19 17:49:48,765 WARN [http-8180-7] [org.collectionspace.services.common.security.SecurityInterceptor:358] Attempt to logout when Nuxeo login context was null2013-08-19 17:49:48,773 WARN [http-8180-7] [org.springframework.security.web.context.HttpSessionSecurityContextRepository:396] Failed to create a session, as response has been committed. Unable to store SecurityContext.2013-08-19 21:07:17,771 ERROR [ContainerBackgroundProcessor[StandardEngine[Catalina]]] [org.apache.catalina.loader.WebappClassLoader:2191] The web application [/collectionspace] appears to have started a thread named [net.sf.ehcache.CacheManager@23aeae74] but has failed to stop it. This is very likely to create a memory leak.2013-08-19 21:07:17,772 ERROR [ContainerBackgroundProcessor[StandardEngine[Catalina]]] [org.apache.catalina.loader.WebappClassLoader:2191] The web application [/collectionspace] appears to have started a thread named [MultiThreadedHttpConnectionManager cleanup] but has failed to stop it. This is very likely to create a memory leak.2013-08-19 21:07:17,780 ERROR [ContainerBackgroundProcessor[StandardEngine[Catalina]]] [org.apache.catalina.loader.WebappClassLoader:2453] The web application [/collectionspace] created a ThreadLocal with key of type [ch.elca.el4j.services.xmlmerge.XmlMergeContext$1] (value [ch.elca.el4j.services.xmlmerge.XmlMergeContext$1@7e421b4f]) and a value of type [java.util.HashMap] (value [{}]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.2013-08-19 21:07:17,781 ERROR [ContainerBackgroundProcessor[StandardEngine[Catalina]]] [org.apache.catalina.loader.WebappClassLoader:2453] The web application [/collectionspace] created a ThreadLocal with key of type [ch.elca.el4j.services.xmlmerge.XmlMergeContext$1] (value [ch.elca.el4j.services.xmlmerge.XmlMergeContext$1@7e421b4f]) and a value of type [java.util.HashMap] (value [{}]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.2013-08-19 21:09:34,685 (0) [http-8180-4] WARN org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler: Could not merge the include files: settings.xml,local-omca-settings.xml

It looks like the problem is with merging settings.xml and local-omca-settings.xml?

I've tried a second time to create the configuration change in omca-collectionobject.xml (a newly created xml file with only this snippet in it:

+<record id="collection-object">
+

• <section id="identificationInformation">
• <repeat id="responsibleDepartments" has-primary="yes">
• <selector>object-identification-responsible-department</selector>
• <field id="responsibleDepartment" ui-search="repeatable" mini="search"
• seperate_ui_container="true">
• <selector>object-identification-responsible-department</selector>
• <options>
• <option id="">Please select a value</option>
• <option id="art">Art</option>
• <option id="history">History</option>
• <option id="science">Science</option>
• <option id="collections">Collections</option>
• <option id="education">Education</option>
• <option id="professionalservices">Professional Services</option>
• <option id="multi">Multi</option>
• </options>
• </field>
• </repeat>
• <field id="collection" ui-search="repeatable" seperate_ui_container="true">
• <selector>object-identification-collection</selector>
• <options>
• <option id="">Please select a value</option>
• <option id="art">Art</option>
• <option id="artandartifact">Art and Artifact</option>
• <option id="exhibit">Exhibit</option>
• <option id="history">History</option>
• <option id="scientomology">SCI-Entomology</option>
• <option id="scifineart">SCI-Fine Art</option>
• <option id="scigalleryspecimens">SCI-Gallery Specimens</option>
• <option id="scigeology">SCI-Geology</option>
• <option id="sciherbarium">SCI-Herbarium</option>
• <option id="sciherpetology">SCI-Herpetology</option>
• <option id="sciicthyology">SCI-Icthyology</option>
• <option id="sciinvertebrates">SCI-Invertebrates</option>
• <option id="scilapidary">SCI-Lapidary</option>
• <option id="scimalacology">SCI-Malacology</option>
• <option id="scimammalogy">SCI-Mammalogy</option>
• <option id="scimiscellaneous">SCI-Miscellaneous</option>
• <option id="sciornithology">SCI-Ornithology</option>
• <option id="scipaleontology">SCI-Paleontology</option>
• <option id="sciphoto">SCI-Photo</option>
• <option id="scisnuffbottles">SCI-Snuff Bottles</option>
• <option id="specimen">Specimen</option>
• </options>
• </field>
• </section>

+</record>

then according to your last email, I ran "mvn clean install -DskipTest" rather than "mvn deploy -DskipTests". I ran this in the application layer folder called "application" that contains the pom.xml file. In my path it looks like /home/root/application-source/application/. Then, do I understand I also need to run "ant deploy"? I wasn't able to run this in the same folder - I got an error saying this is no build file.

I'm going off your previous instructions, as well as the documentation on the wiki for customizing the application layer:

Hi Becky and Al,
One more set of notes on making 'starting out' customizations,
below: this one a customization of options in dropdown menus.
Aron
(Recommendation: start the CollectionSpace server before making the
following changes. This will help ensure those changes are made
'live.')

• An example of how to replace the default sets of options in the
  dropdown menus for the Responsible Department and OMCA Collection
  fields.
  The existing documentation on updating these option lists is
  confusing, and wildly out of date; we expect to be updating it in the
  near future. The customization method shown here as an example
  reflects recently-added 'merge' capabilities that allow you to simply
  replicate the block of configuration you want to customize, within a
  separate file for your own museum; it will override the corresponding
  configuration block in the default settings:
  Actual change(s) made, within the source code tree for
  CollectionSpace's Application layer:
  https://github.com/aronr/application/commit/b7a47d94fc6d44d0cad74f6444710a35373291c7
  You can compare this to the default configuration file for the
  Cataloging record, in which the default options for those two dropdown
  menus appear:
  https://github.com/aronr/application/blob/b7a47d94fc6d44d0cad74f6444710a35373291c7/tomcat-main/src/main/resources/defaults/base-collectionobject.xml#L112
  To copy (deploy) these changes to the server folder, enter the
  following at a command prompt, from within the top-level folder of the
  Application source code tree:
  mvn deploy -DskipTests

Sorry I'm not getting this! Do you have any ideas?

Thanks again,

Al

Al Bersch
Digital Project Coordinator
Oakland Museum of California
1000 Oak Street, Oakland, CA 94607
abersch@museumca.org
510-318-8468

From: "Aron Roberts" < aronroberts@gmail.com >
To: "Al Bersch" < abersch@museumca.org >
Cc: "talk" < talk@lists.collectionspace.org >
Sent: Friday, August 16, 2013 1:28:48 PM

Subject: Re: [Talk] deploy mvn error

The key is likely this snippet, from near the beginning of that long and singularly unhelpful chain of messages:
"org.collectionspace.chain.csp.config.ConfigException: Error loading config"

There may have been an error made in whatever configuration file, or files, were modified. After they were deployed (copied) to the server, when the Application layer read them, it got confused and barfed out this long stack trace.

Typically, this means the file(s), after being modified, weren't well-formed XML - perhaps an ending tag was left out somewhere? - or they didn't conform to the Application layer's expectation of what 'tags' (XML elements) are expected, in which hierarchical locations within the file.

Yes, reverting to a snapshot and re-deploying (via 'mvn clean install -DskipTests') and restarting Tomcat, should resolve the issue. You might also try, however, using a utility app that can show you differences between two files - your current version and your snapshot - and see if the error is readily made apparent by looking at those changes in that 'diff' view. (If you're using Mac OS X, there's a list of such apps at http://apple.stackexchange.com/a/87188 )

It's also worth checking the current cspace-app.log and catalina.{today's date}.log to see if there may be any log message specifically pinpointing the configuration error.

Aron

On Fri, Aug 16, 2013 at 1:16 PM, Al Bersch < abersch@museumca.org > wrote: