Hello, Thanks for again for all the tips solving my installation problem. I checked the permissions but had no success and also the re initializing of the database did not help. I than upgraded my Postgresql to 9.2 and now collection space is running, thanks Christopher for the hint. @Chris Hoffman: I will try to put a document together what we are planning to store into collection space. We have separate specialized systems to store genomic data, laboratory data etc. We won’t to store the patients, all the patient diagnostics, samples, informed consent, if the patient is in a study*. Our goal is than to connect this data together somehow. I’m thinking of a portal system to connect the gui and the user management and login of the different subsystems. And on the db side manage the id system for all subsystems. I will test collection space in the next weeks and hopefully learn if it is suitable for our system. Robert Reihs >>> Chris Hoffman 01/19/13 6:58 PM >>> Hello Robert, I am managing the projects that are deploying CollectionSpace for a number of museums at UC Berkeley. I'm very interested in hearing more about what you are doing. I'm not familiar with BioBanks, so I looked up a bit of information online (e.g., at wikipedia). I do think that CollectionSpace could be a good fit. In fact, our natural history museums store and manage tissue specimens that come from plants and animals, so we have been thinking about how to relate derivatives like this and manage the complex transactions needed for genomic and other laboratory work. There is certainly more that could be done to support BioBanks, but I suspect for management of a collection of samples, CollectionSpace should be a good fit. Do you have any documents describing your requirements (e.g., fields needed in the database, kinds of transactions that need to be supported)? Thanks, Chris Hoffman Chris Hoffman, Ph.D. Manager of Informatics Services IST-Research Information Technologies, UC Berkeley chris.hoffman@berkeley.edu 510-642-9643 On Jan 18, 2013, at 1:42 PM, Robert Reihs wrote: > Hello Jesse, Patrick and Aron, > > Thank you for your detailed answers. I will try to answer all your questions and will test your suggestions and will give you feedback what helped. I’m using Collection Space 3.2 with a Debian 6 in a VirtualBox. I had first a problem with wrong permissions I have set and rerun the ant create_db script, but I will control the permissions for the files and users and rerun the creation script. Perhaps I have missed something. I will also look into my pg config files, and will provide them also for the talk list. > > Thanks for the suggestion of testing the windows installer, and if I find there some problems I will send you also the error reports. > > Concerning my interest in using collection space, no it’s not a museum. We are working in the field of BioBanking. We have identified close relations in this area, in the structure of the date, and the user needs. And we have experience with a museum software system in our BioBank in Graz. We get a lot of request from starting BioBanks how they can setup an IT environment. Most of these have little budget so we are now trying to setup a sample environment with open source tools they can use. I have screened a lot of systems designed in the field of medicine but they are normally specialized systems for a specific purpose, and not suitable for a BioBank. So I searched for museums software and your system sounds promising. > > Thanks again for your answers, I will test your suggestions I hope tomorrow or latest on Monday and will give you a report. > > Robert Reihs > > > > On 18.01.2013 21:06, Aron Roberts wrote: >> Hi Robert, >> >> First, thanks for your interest in CollectionSpace and for your >> problem report. We'd love to learn more about your interest and >> possible application - is it for a museum at the Medical University of >> Graz? Our apologies for the delayed response; this month, it just >> happens to be the case that many of us are working under deadline, >> helping launch new CollectionSpace systems or upgrades for various >> museums. >> >> Jesse's suggestions are an excellent approach, and worth >> considering. In particular, if you re-run 'ant create_db import', you >> might carefully look for error messages in the output from running >> that command. As Jesse notes, this will wipe and reinitialize the >> databases that CollectionSpace uses, and then - possibly in >> conjunction with additional code that runs at system startup - will >> import a default set of users, roles, and permissions, which you can >> use to initially log into the system and then create additional user >> accounts. Since you're experiencing problems trying to log in with >> even the default user accounts, re-running this is thus a good place >> to start. >> >> You might also look at Jesse's other suggestions, as well. >> >> One more thing caught my eye; this error: >> >>> [org.collectionspace.services.common.ServiceMain:178] Default accounts and permissions setup failed with exception(s): null >>> java.lang.NullPointerException at org.collectionspace.services.common.authorization_mgt.AuthorizationCommon.persist(AuthorizationCommon.java:1175) >> This hints that perhaps CollectionSpace is having difficulty writing >> to ("persisting" data to) one or more databases. By default, >> CollectionSpace uses a database named 'cspace', to which >> authentication and authorization data is written. If it's using an >> incorrect PostgreSQL database user name and/or password to talk to >> that database, that might explain that error. >> >> You might check that passwords for the default (typically >> 'postgres'), 'cspace', and 'nuxeo' database users are specified in >> environment variables, and that you can successfully use those >> passwords to log into the database. You can find the relevant >> environment variables listed in any of the installation documents, >> such as those listed here: >> >> http://wiki.collectionspace.org/display/DOC/Installing+CollectionSpace >> >> You can then try using the 'psql' command line utility to log into >> PostgreSQL as each of those users, using the passwords you've found in >> those environment variables; e.g. on a Linux, Mac OS X, or other >> Unix-like system: >> >> psql -U postgres >> (at the password prompt, enter the value you get when you type: >> echo $DB_PASSWORD ) >> >> psql -U nuxeo -d nuxeo >> (at the password prompt, enter the value you get when you type: >> echo $DB_PASSWORD_NUXEO ) >> >> psql -U cspace -d cspace >> (at the password prompt, enter the value you get when you type: >> echo $DB_PASSWORD_CSPACE ) >> >> If a) any of these 'echo' commands don't return a value, you'll need >> to set up those values in your environment, then re-run the commands >> 'ant undeploy deploy' and 'ant create_db import'. And if b), those >> 'echo' commands all do return values, but you can't successfully log >> in to PostgreSQL as each one of those three users, the most likely >> next thing to look at is the configuration of the pg_hba.conf file, >> that gives permissions to users to log into the PostgreSQL database. >> That's discussed in the "Configuring PostgreSQL" section of documents >> like this one: >> >> http://wiki.collectionspace.org/display/DOC/PostgreSQL+Installation+-+Windows%2C+Mac+OS+X%2C+Generic+Linux >> >> You are also welcome to share your copy of that file with us and >> others on the list. >> >> Best of luck! Please do let us know, as Jesse suggested, what >> version of CollectionSpace you've installed and what other steps >> you've tried so far. (If you have a choice, we'd strongly encourage >> you to consider version 3.2, which is recent, well-tested, and >> contains many bugfixes and performance improvements over earlier >> versions.) >> >> Aron Roberts >> >> P.S. I've just now also seen the response from Patrick Schmitz. >> Definitely, if you're using a Windows system, it would be very much >> worth trying out the newly available installer for that platform. >> >> On Fri, Jan 18, 2013 at 11:22 AM, Jesse Martinez wrote: >>> Hi Robert, >>> >>> That error message doesn't ring a bell for me, yet it does sound like there >>> is an issue with authentication. >>> Mind answering a few questions to help us understand your setup? >>> Are you running the latest CollectionSpace version 3.2? Which operating >>> system are you running? >>> Have you tried re-running the 'ant create_db import' target to see if that >>> may clear up the errors? This will re-initialize the database. >>> Also, and this is just a hunch, but which user account "owns" the >>> apache-tomcat files as well as the service layer source code? Are you >>> starting CollectionSpace with this same user account? If there is a mismatch >>> with the user account owning the different files then this can sometimes >>> cause issues. >>> >>> - Jesse >>> >>> >>> On Tue, Jan 15, 2013 at 5:32 AM, Reihs Robert >>> wrote: >>>> Hi,I’m new to collection space and testing it out for use in our >>>> facility.I have installed the system get some problem but solved all of >>>> them. When I nowstart the server, the page is loading but I can’t log in >>>> to the System (‘Invalidemail/password combination’). The problem is >>>> somewhere in theNuxeo DB generation. >>>> Thanks foryour help, >>>> RobertReihs >>>> ------------------------------------------------------- >>>> catalina.out >>>> ------------------------------------------------------- >>>> 2013-01-15 11:08:49,429 WARN [main] [org.nuxeo.common.Environment:393] >>>> Could not get nuxeo.home neither nuxeo.home.dir system properties, will >>>> use /usr/local/share/apache-tomcat-6.0.33/nuxeo-server >>>> 2013-01-15 11:08:50,923 WARN [main] >>>> >>>> [org.nuxeo.ecm.platform.commandline.executor.service.CommandLineExecutorComponent:122] >>>> Command not available: wpd2text (command wpd2text not found in system >>>> path. You need to install wpd2text (deb: libwpd-tools) >>>> http://libwpd.sourceforge.net/download.html) >>>> 2013-01-15 11:08:51,201 WARN [main] >>>> [org.nuxeo.ecm.core.search.api.client.querymodel.QueryModelService:123] >>>> Query models are deprecated as of Nuxeo 5.4 and will be removed for >>>> Nuxeo 5.6: the query model 'DEFAULT_CREATION_CONTAINER_LIST_PROVIDER' >>>> should be upgraded to use content views >>>> Jan 15, 2013 11:08:52 AM >>>> org.artofsolving.jodconverter.util.PlatformUtils searchExistingfile >>>> INFO: Jod will be using /usr/lib/openoffice >>>> Jan 15, 2013 11:08:52 AM >>>> org.artofsolving.jodconverter.office.ProcessPoolOfficeManager >>>> INFO: ProcessManager implementation is UnixProcessManager >>>> 2013-01-15 11:08:52,564 WARN [main] >>>> [org.nuxeo.ecm.platform.convert.ooomanager.OOoManagerComponent:221] >>>> OpenOffice was not found, JOD Converter won't be available: a process >>>> with acceptString 'socket,host=127.0.0.1,port=2002' is already running; >>>> pid 3294 >>>> 2013-01-15 11:08:52,596 ERROR [main] >>>> [org.nuxeo.runtime.osgi.OSGiRuntimeService:529] Nuxeo EP Started >>>> ====================================================================== >>>> = Nuxeo EP Started >>>> ====================================================================== >>>> = Component Loading Status: Pending: 1 / Unstarted: 0 / Total: 203 >>>> * service:org.nuxeo.ecm.platform.picture.web.preview.adapter.contrib >>>> requires [service:org.nuxeo.ecm.platform.preview.adapter.contrib] >>>> ====================================================================== >>>> 2013-01-15 11:08:52,614 INFO [main] >>>> [org.springframework.context.support.ClassPathXmlApplicationContext:447] >>>> Refreshing >>>> org.springframework.context.support.ClassPathXmlApplicationContext@50620f: >>>> startup date [Tue Jan 15 11:08:52 CET 2013]; root of context hierarchy >>>> 2013-01-15 11:08:52,617 INFO [main] >>>> [org.springframework.beans.factory.xml.XmlBeanDefinitionReader:315] >>>> Loading XML bean definitions from class path resource >>>> [applicationContext-authorization.xml] >>>> 2013-01-15 11:08:52,920 INFO [main] >>>> [org.springframework.beans.factory.support.DefaultListableBeanFactory:532] >>>> Pre-instantiating singletons in >>>> >>>> org.springframework.beans.factory.support.DefaultListableBeanFactory@a36771: >>>> defining beans >>>> >>>> [expressionHandler,permissionEvaluator,aclService,dataSource,lookupStrategy,aclAuthorizationStrategy,aclCache,transactionManager,org.springframework.aop.config.internalAutoProxyCreator,org.springframework.transaction.annotation.AnnotationTransactionAttributeSource#0,org.springframework.transaction.interceptor.TransactionInterceptor#0,org.springframework.transaction.config.internalTransactionAdvisor,cspaceAuthorizationProvider]; >>>> root of factory hierarchy >>>> 2013-01-15 11:08:52,998 INFO [main] >>>> [org.springframework.cache.ehcache.EhCacheManagerFactoryBean:99] >>>> Initializing EHCache CacheManager >>>> 2013-01-15 11:08:53,009 WARN [main] >>>> [net.sf.ehcache.config.ConfigurationFactory:124] No configuration found. >>>> Configuring ehcache from ehcache-failsafe.xml found in the classpath: >>>> >>>> jar:file:/usr/local/share/apache-tomcat-6.0.33/lib/ehcache-1.6.2.jar!/ehcache-failsafe.xml >>>> Jan 15, 2013 11:08:53 AM net.sf.ehcache.config.ConfigurationFactory >>>> parseConfiguration >>>> WARNING: No configuration found.ehcache-failsafe.xml found in the >>>> classpath: >>>> >>>> jar:file:/usr/local/share/apache-tomcat-6.0.33/lib/ehcache-1.6.2.jar!/ehcache-failsafe.xml >>>> Could not find Subject! >>>> Could not find Subject! >>>> 2013-01-15 11:08:54,488 WARN [main] >>>> >>>> [org.collectionspace.services.common.authorization_mgt.AuthorizationCommon:1063] >>>> Could not retrieve a lifecycle transition definition list from: >>>> idgenerators with tenant ID = 2 >>>> 2013-01-15 11:08:54,490 WARN [main] >>>> >>>> [org.collectionspace.services.common.authorization_mgt.AuthorizationCommon:1063] >>>> Could not retrieve a lifecycle transition definition list from: id with >>>> tenant ID = 2 >>>> 2013-01-15 11:08:54,491 WARN [main] >>>> >>>> [org.collectionspace.services.common.authorization_mgt.AuthorizationCommon:1063] >>>> Could not retrieve a lifecycle transition definition list from: >>>> servicegroups with tenant ID = 2 >>>> 2013-01-15 11:08:54,570 ERROR [main] >>>> [org.collectionspace.services.common.ServiceMain:178] Default accounts >>>> and permissions setup failed with exception(s): null >>>> java.lang.NullPointerException >>>> at >>>> >>>> org.collectionspace.services.common.authorization_mgt.AuthorizationCommon.persist(AuthorizationCommon.java:1175) >>>> at >>>> >>>> org.collectionspace.services.common.authorization_mgt.AuthorizationCommon.createDefaultWorkflowPermissions(AuthorizationCommon.java:1105) >>>> at >>>> >>>> org.collectionspace.services.common.ServiceMain.initialize(ServiceMain.java:175) >>>> at >>>> >>>> org.collectionspace.services.common.ServiceMain.getInstance(ServiceMain.java:112) >>>> at >>>> >>>> org.collectionspace.services.common.ServiceMain.getInstance(ServiceMain.java:96) >>>> at >>>> >>>> org.collectionspace.services.common.CollectionSpaceServiceContextListener.contextInitialized(CollectionSpaceServiceContextListener.java:23) >>>> at >>>> >>>> org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4206) >>>> at >>>> org.apache.catalina.core.StandardContext.start(StandardContext.java:4705) >>>> at >>>> >>>> org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799) >>>> at >>>> org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779) >>>> at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:601) >>>> at >>>> >>>> org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:675) >>>> at >>>> >>>> org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:601) >>>> at >>>> org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:502) >>>> at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1317) >>>> at >>>> org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:324) >>>> at >>>> >>>> org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:142) >>>> at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1065) >>>> at org.apache.catalina.core.StandardHost.start(StandardHost.java:840) >>>> at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057) >>>> at >>>> org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463) >>>> at >>>> org.apache.catalina.core.StandardService.start(StandardService.java:525) >>>> at >>>> org.apache.catalina.core.StandardServer.start(StandardServer.java:754) >>>> at org.apache.catalina.startup.Catalina.start(Catalina.java:595) >>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) >>>> at >>>> >>>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) >>>> at >>>> >>>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) >>>> at java.lang.reflect.Method.invoke(Method.java:597) >>>> at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) >>>> at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) >>>> 2013-01-15 11:09:02,050 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for idgenerators in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,097 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for id in repository. Creating new workspace >>>> ... >>>> 2013-01-15 11:09:02,128 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for servicegroups in repository. Creating new >>>> >>>> worksp[org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for collectionobjects in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:02,208 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for blobs in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,244 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for intakes in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,282 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for loansin in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,319 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for loansout in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,350 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for objectexit in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,389 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for batch in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,426 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for groups in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,456 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for imports in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,481 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for media in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,513 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for movements in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,549 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for workflow in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,602 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for reports in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,648 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for vocabularies in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,714 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for vocabularyitems in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:02,762 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for orgauthorities in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,799 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for organizations in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,824 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for personauthorities in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:02,850 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for persons in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,876 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for locationauthorities in repository. >>>> Creating new workspace ... >>>> 2013-01-15 11:09:02,904 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for locations in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,935 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspac2013-01-15 11:09:02,960 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for places in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:02,984 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for taxonomyauthority in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:03,012 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for taxon in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:03,047 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for conceptauthorities in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:03,079 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for concepts in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:03,101 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for acquisitions in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:03,128 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for relations in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:03,156 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for dimensions in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:03,184 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for contacts in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:03,213 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for notes in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:08,821 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for idgenerators in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:08,854 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for id in repository. Creating new workspace >>>> ... >>>> 2013-01-15 11:09:08,886 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for servicegroups in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:08,925 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for collectionobjects in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:08,951 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for blobs in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:08,967 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for intakes in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:08,986 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for loansin in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,013 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for loansout in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,037 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for objectexit in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,063 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for batch in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,088 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for groups in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,114 WARN [main] >>>> [Could not find workspace for imports in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,144 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for media in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,169 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for movements in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,194 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for workflow in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,220 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for reports in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,252 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for vocabularies in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,292 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for vocabularyitems in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:09,339 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for orgauthorities in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,365 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for organizations in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,400 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for personauthorities in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:09,427 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for persons in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,450 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for locationauthorities in repository. >>>> Creating new workspace ... >>>> 2013-01-15 11:09:09,473 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for locations in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,502 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for placeauthorities in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:09,524 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for places in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,542 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for taxonomyauthority in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:09,570 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for taxon in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,593 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for conceptauthorities in repository. Creating >>>> new workspace ... >>>> 2013-01-15 11:09:09,615 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for concepts in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,636 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for acquisitions in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,656 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for relations in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,677 WARN [main] >>>> >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:232013-01-15 >>>> 11:09:09,707 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for contacts in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:09,725 WARN [main] >>>> [org.collectionspace.services.nuxeo.client.java.TenantRepository:230] >>>> Could not find workspace for notes in repository. Creating new >>>> workspace ... >>>> 2013-01-15 11:09:10,068 WARN [main] >>>> [org.collectionspace.services.common.init.RunSqlScript:177] Running SQL >>>> script db/postgresql/create_id_generators_table.sql resulted in error: >>>> 2013-01-15 11:09:10,069 WARN [main] >>>> [org.collectionspace.services.common.init.RunSqlScript:183] Running SQL >>>> script db/postgresql/create_id_generators_table.sql failed to return >>>> expected results. >>>> 2013-01-15 11:09:10,076 WARN [main] >>>> [org.collectionspace.services.common.init.RunSqlScript:177] Running SQL >>>> script db/postgresql/load_id_generators.sql resulted in error: >>>> 2013-01-15 11:09:10,076 WARN [main] >>>> [org.collectionspace.services.common.init.RunSqlScript:183] Running SQL >>>> script db/postgresql/load_id_generators.sql failed to return expected >>>> results. >>>> 2013-01-15 11:09:11,331 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:11,332 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:11,332 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:11,332 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:11,332 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:11,333 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:11,333 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:11,348 WARN [main] >>>> [org.collectionspace.services.common.init.RunSqlScript:177] Running SQL >>>> script db/postgresql/create_id_generators_table.sql resulted in error: >>>> 2013-01-15 11:09:11,348 WARN [main] >>>> [org.collectionspace.services.common.init.RunSqlScript:183] Running SQL >>>> script db/postgresql/create_id_generators_table.sql failed to return >>>> expected results. >>>> 2013-01-15 11:09:11,357 WARN [main] >>>> [org.collectionspace.services.common.init.RunSqlScript:177] Running SQL >>>> script db/postgresql/load_id_generators.sql resulted in error: >>>> 2013-01-15 11:09:11,357 WARN [main] >>>> [org.collectionspace.services.common.init.RunSqlScript:183] Running SQL >>>> script db/postgresql/load_id_generators.sql failed to return expected >>>> results. >>>> 2013-01-15 11:09:12,604 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:12,604 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:12,604 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:12,605 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:12,605 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:12,605 ERROR [main] >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> 2013-01-15 11:09:12,605 >>>> [org.collectionspace.services.common.config.ConfigUtils:51] No domain >>>> name was specified on call to getRepositoryName() method. >>>> [INFO] Starting up the CollectionSpace Services' JAX-RS application. >>>> Static initializtion of: >>>> org.collectionspace.services.common.security.SecurityInterceptor >>>> [INFO] CollectionSpace Services' JAX-RS application started. >>>> 2013-01-15 11:09:13,468 INFO [main] >>>> [org.apache.catalina.startup.HostConfig:1024] Deploying web application >>>> directory docs >>>> 2013-01-15 11:09:13,511 INFO [main] >>>> [org.apache.catalina.startup.HostConfig:1024] Deploying web application >>>> directory ROOT >>>> 2013-01-15 11:09:13,559 INFO [main] >>>> [org.apache.coyote.http11.Http11Protocol:209] Starting Coyote HTTP/1.1 >>>> on http-8180 >>>> 2013-01-15 11:09:13,584 INFO [main] >>>> [org.apache.coyote.http11.Http11Protocol:209] Starting Coyote HTTP/1.1 >>>> on http-8543 >>>> 2013-01-15 11:09:13,634 INFO [main] >>>> [org.apache.jk.common.ChannelSocket:393] JK: ajp13 listening on >>>> /0.0.0.0:8009 >>>> 2013-01-15 11:09:13,641 INFO [main] [org.apache.jk.server.JkMain:386] >>>> Jk running ID=0 time=0/23 config=null >>>> 2013-01-15 11:09:13,650 INFO [main] >>>> [org.apache.catalina.startup.Catalina:603] Server startup in 28414 ms >>>> 2013-01-15 11:10:33,316 (107476) [http-8180-1] INFO >>>> org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler: >>>> XMLMerge result output to: >>>> >>>> /usr/local/share/apache-tomcat-6.0.33/temp/merged-settings.xml_local-core-settings.xml-.xml >>>> 2013-01-15 11:10:33,316 (107476) [http-8180-2] INFO >>>> org.collectionspace.chain.csp.config.impl.parser.AssemblingContentHandler: >>>> XMLMerge result output to: >>>> >>>> /usr/local/share/apache-tomcat-6.0.33/temp/merged-settings.xml_local-core-settings.xml-.xml >>>> 2013-01-15 11:10:55,100 (129260) [http-8180-2] INFO >>>> org.apache.commons.httpclient.auth.AuthChallengeProcessor: basic >>>> authentication scheme selected >>>> 2013-01-15 11:10:55,235 (129395) [http-8180-2] INFO >>>> org.apache.commons.httpclient.HttpMethodDirector: Failure authenticating >>>> with BASIC 'org.collectionspace.services'@localhost:8180 >>>> 2013-01-15 11:10:55,236 (129396) [http-8180-2] ERROR >>>> >>>> org.collectionspace.chain.csp.persistence.services.connection.ReturnedDocument: >>>> Got error : Apache Tomcat/6.0.33 - Error report HTTP >>>> Status 401 - Unknown Exceptiontype Status reportmessage Unknown >>>> Exceptiondescription This request requires HTTP authentication (Unknown >>>> Exception).Apache Tomcat/6.0.33 >>>> >>>> >>>> >>>> >>>> _______________________________________________ >>>> Talk mailing list >>>> Talk@lists.collectionspace.org >>>> >>>> http://lists.collectionspace.org/mailman/listinfo/talk_lists.collectionspace.org >>> >>> >>> _______________________________________________ >>> Talk mailing list >>> Talk@lists.collectionspace.org >>> http://lists.collectionspace.org/mailman/listinfo/talk_lists.collectionspace.org >>> > > _______________________________________________ > Talk mailing list > Talk@lists.collectionspace.org > http://lists.collectionspace.org/mailman/listinfo/talk_lists.collectionspace.org